R. norvegicus Gene: Puf60 - ENSRNOG00000009960 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009960
NamePuf60
Descriptionpoly-U binding splicing factor 60 [Source:RGD Symbol;Acc:621674]
OrganismRattus norvegicus (rat)
Synonym(s)siahbp1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.00e3
  • 1.00e3
96.35412
  • 96.35412
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.10e3
  • 1.10e3
95.98658
  • 95.98658
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.15e3
  • 1.15e3
95.81457
  • 95.81457
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
95.51362
  • 95.51362
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.30e3
  • 1.30e3
95.27450
  • 95.27450
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e3
  • 1.30e3
  • 1.39e3
95.26717
  • 95.26717
  • 94.94999
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
95.13550
  • 95.13550
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
95.12376
  • 95.12376
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.40e3
  • 1.40e3
94.87916
  • 94.87916
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.44e3
  • 1.44e3
94.73943
  • 94.73943
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
94.71999
  • 94.71999
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.60e3
  • 1.60e3
94.17879
  • 94.17879
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.61e3
  • 1.61e3
94.12047
  • 94.12047
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.75e3
  • 1.75e3
  • 2.11e3
93.63424
  • 93.63424
  • 92.29471
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.78e3
  • 1.78e3
93.50702
  • 93.50702
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.83e3
  • 1.83e3
93.32017
  • 93.32017
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.11e3
  • 2.11e3
92.32184
  • 92.32184
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
  • 3.03e3
91.64850
  • 91.64850
  • 88.94117
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.48e3
  • 2.48e3
90.97359
  • 90.97359
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
3.65e3
  • 3.65e3
  • 3.68e3
86.70817
  • 86.70817
  • 86.57534
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAC126537
EnsemblENSRNOG00000009960 (Puf60)
RGD621674 (Puf60)
Uniprot/SPTREMBLA0A0H2UHZ6, A0A0H2UHZ6_RAT
Uniprot/SWISSPROTPUF60_RAT, Q9WV25

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