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R. norvegicus Gene: Htr2a - ENSRNOG00000010063 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010063
NameHtr2a
Description5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled [Source:RGD Symbol;Acc:61800]
OrganismRattus norvegicus (rat)
Synonym(s)5-ht-2, 5-ht-2a, 5-ht2a, 5ht-2, htr2
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.91e3
  • 5.91e3
  • 8.75e3
78.47
  • 78.47
  • 68.11
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.82e3
  • 6.82e3
  • 8.07e3
75.16
  • 75.16
  • 70.61
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.82
  • 50.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.93
  • 47.93
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.41
  • 45.41
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.64
  • 42.64
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.24
  • 42.24
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.55
  • 40.55
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.87
  • 39.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.25
  • 39.25
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.13
  • 38.13
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
37.97
  • 37.97
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.82
  • 37.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.74e4
  • 1.74e4
36.49
  • 36.49
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.18
  • 36.18
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.80e4
  • 1.80e4
34.45
  • 34.45
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
32.94
  • 32.94
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
  • 2.11e4
31.53
  • 31.53
  • 23.19
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010063.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000010063.

Cross-references

EnsemblENSRNOG00000010063 (Htr2a)
RGD61800 (Htr2a)
EMBLM30705, M64867, X13971
Uniprot/SWISSPROT5HT2A_RAT, P14842

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