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R. norvegicus Gene: Cldn10 - ENSRNOG00000010085 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010085
NameCldn10
Descriptionclaudin 10 [Source:RGD Symbol;Acc:1308027]
OrganismRattus norvegicus (rat)
Synonym(s)cldn10_predicted, loc290485
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
675
  • 675
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
696
  • 696
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
  • 4.27e3
85.48
  • 85.48
  • 84.44
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.42e3
  • 4.42e3
  • 4.53e3
83.92
  • 83.92
  • 83.51
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
74.26
  • 74.26
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.11
  • 58.11
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.29
  • 49.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
  • 2.14e4
49.26
  • 49.26
  • 22.00
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.08
  • 49.08
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
48.89
  • 48.89
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.62
  • 40.62
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.03
  • 38.03
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
33.39
  • 33.39
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
31.78
  • 31.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.23
  • 29.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010085.

Cross-references

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