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R. norvegicus Gene: Cldn11 - ENSRNOG00000010263 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010263
NameCldn11
Descriptionclaudin 11 [Source:RGD Symbol;Acc:71081]
OrganismRattus norvegicus (rat)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
160
  • 160
  • 477
99.42
  • 99.42
  • 98.27
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
184
  • 184
  • 204
99.33
  • 99.33
  • 99.26
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
692
  • 692
  • 2.80e3
97.48
  • 97.48
  • 89.79
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.71e3
  • 1.71e3
  • 1.79e3
93.78
  • 93.78
  • 93.48
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.77e3
  • 5.77e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.35
  • 55.35
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
53.95
  • 53.95
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.71
  • 50.71
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
48.92
  • 48.92
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
48.88
  • 48.88
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.24
  • 47.24
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.72
  • 43.72
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
43.08
  • 43.08
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
37.95
  • 37.95
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.15
  • 35.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
26.53
  • 26.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010263.

Cross-references

EnsemblENSRNOG00000010263 (Cldn11)
RGD71081 (Cldn11)
EMBLAABR07009900, BC070927, CH473961
Uniprot/SPTREMBLQ6IRG7, Q6IRG7_RAT

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