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R. norvegicus Gene: Slc17a9 - ENSRNOG00000010275 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010275
NameSlc17a9
Descriptionsolute carrier family 17 (vesicular nucleotide transporter), member 9 [Source:RGD Symbol;Acc:1311940]
OrganismRattus norvegicus (rat)
Synonym(s)loc362287, rgd1311940, rgd1311940_predicted
Orthologs(s)23 orthologs
Paralog(s)28 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.80e3
  • 2.80e3
  • 3.69e3
  • 4.32e3
89.79
  • 89.79
  • 86.56
  • 84.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
86.14
  • 86.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.15e3
  • 6.15e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.02e3
  • 9.02e3
67.15
  • 67.15
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.89
  • 58.89
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.64
  • 57.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
  • 1.61e4
54.84
  • 54.84
  • 41.52
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
  • 1.62e4
53.26
  • 53.26
  • 40.84
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.25
  • 52.25
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.58
  • 51.58
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.25
  • 51.25
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
50.50
  • 50.50
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.76
  • 46.76
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.73
  • 45.73
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.55e4
45.49
  • 45.49
  • 43.51
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010275.

Paralogs (same species)

Cross-references

EnsemblENSRNOG00000010275 (Slc17a9)
RGD1311940 (Slc17a9)
EMBLAABR07054982, CH474066
Uniprot/SPTREMBLD3ZUN1, D3ZUN1_RAT

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