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R. norvegicus Gene: Tspo - ENSRNOG00000010549 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010549
NameTspo
Descriptiontranslocator protein [Source:RGD Symbol;Acc:2228]
OrganismRattus norvegicus (rat)
Synonym(s)bzrp, mbr, pbr, pkbs, ptbzr, ptbzr02, ratptbzr02
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
595
  • 595
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
977
  • 977
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
96.18
  • 96.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e3
  • 1.15e3
95.81
  • 95.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.71e3
  • 1.71e3
93.76
  • 93.76
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.96e3
  • 1.96e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.04e3
  • 2.04e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.49e3
  • 2.49e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.71e3
  • 2.71e3
90.14
  • 90.14
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.15e3
  • 3.15e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.39e3
  • 3.39e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.43e3
  • 3.43e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.44e3
  • 3.44e3
  • 6.20e3
87.46
  • 87.46
  • 77.42
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.32e3
  • 4.32e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.35e3
  • 4.35e3
  • 1.32e4
84.16
  • 84.16
  • 51.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
6.08e3
  • 6.08e3
  • 6.53e3
  • 8.53e3
77.87
  • 77.87
  • 76.22
  • 68.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.13e3
  • 7.13e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.43e4
52.40
  • 52.40
  • 47.75
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.38e4
  • 1.38e4
  • 1.40e4
49.84
  • 49.84
  • 48.97
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.71
  • 49.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010549.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000010549.

Cross-references

EnsemblENSRNOG00000010549 (Tspo)
RGD2228 (Tspo)
EMBLJ05122, M84221
Uniprot/SWISSPROTP16257, TSPO_RAT

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