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R. norvegicus Gene: Efcab10 - ENSRNOG00000010730 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010730
NameEfcab10
DescriptionEF-hand calcium binding domain 10 [Source:RGD Symbol;Acc:1307943]
OrganismRattus norvegicus (rat)
Synonym(s)loc362727, rgd1307943
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
151
  • 151
  • 948
99.45
  • 99.45
  • 96.55
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
  • 1.40e4
91.50
  • 91.50
  • 48.96
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.95
  • 62.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.83
  • 57.83
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.43e4
54.17
  • 54.17
  • 47.95
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
48.84
  • 48.84
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.81
  • 48.81
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.21
  • 42.21
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.91e4
  • 1.91e4
30.35
  • 30.35
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.16
  • 29.16
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.08e4
  • 2.08e4
24.36
  • 24.36
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
22.25
  • 22.25
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.20e4
  • 2.20e4
19.77
  • 19.77
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.26e4
  • 2.26e4
17.64
  • 17.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.27e4
  • 2.27e4
17.13
  • 17.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000010730.

Cross-references

EnsemblENSRNOG00000010730 (Efcab10)
RGD1307943 (Efcab10)
EMBLAABR07063852
Uniprot/SPTREMBLD4AA55, D4AA55_RAT

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