R. norvegicus Gene: Atp13a1 - ENSRNOG00000010776 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000010776
NameAtp13a1
DescriptionATPase type 13A1 [Source:RGD Symbol;Acc:1306033]
OrganismRattus norvegicus (rat)
Synonym(s)atp13a, atp13a1_predicted, loc290673

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.54e3
  • 2.54e3
90.74457
  • 90.74457
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.72e3
  • 2.72e3
90.09326
  • 90.09326
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
3.07e3
  • 3.07e3
88.82029
  • 88.82029
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
  • 4.60e3
85.71904
  • 85.71904
  • 83.24105
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.36e3
  • 4.36e3
84.11230
  • 84.11230
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.41e3
  • 4.41e3
83.90710
  • 83.90710
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.47e3
  • 4.47e3
83.70354
  • 83.70354
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.05e3
  • 5.05e3
81.58281
  • 81.58281
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
81.45257
  • 81.45257
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.30e3
  • 5.30e3
80.68009
  • 80.68009
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.41e3
  • 5.41e3
80.28741
  • 80.28741
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.46e3
  • 5.46e3
80.07984
  • 80.07984
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
79.89375
  • 79.89375
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
79.83952
  • 79.83952
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.80e3
  • 5.80e3
  • 6.49e3
78.85899
  • 78.85899
  • 76.32232
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
75.45428
  • 75.45428
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.78e3
  • 6.78e3
75.28639
  • 75.28639
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.04e3
  • 7.04e3
74.32144
  • 74.32144
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
  • 1.36e4
71.73509
  • 71.73509
  • 50.24620
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.01e4
  • 1.01e4
  • 1.01e4
63.28158
  • 63.28158
  • 63.20578
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07024882, CH474031
EnsemblENSRNOG00000010776 (Atp13a1)
RGD1306033 (Atp13a1)
Uniprot/SPTREMBLG3V7I3, G3V7I3_RAT

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