R. norvegicus Gene: Hmgcll1 - ENSRNOG00000011193 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000011193
NameHmgcll1
Description3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 [Source:RGD Symbol;Acc:1565090]
OrganismRattus norvegicus (rat)
Synonym(s)loc367112, rgd1565090

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
9.47e3
  • 9.47e3
64.62894
  • 64.62894
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
48.74327
  • 48.74327
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
41.49040
  • 41.49040
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
39.92071
  • 39.92071
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
37.66384
  • 37.66384
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
36.00389
  • 36.00389
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
35.92976
  • 35.92976
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
34.44145
  • 34.44145
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
25.31501
  • 25.31501
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCH473954
EnsemblENSRNOG00000011193 (Hmgcll1)
RGD1565090 (Hmgcll1)
Uniprot/SWISSPROTD4A5C3, HMGC2_RAT

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