R. norvegicus Gene: Pragmin - ENSRNOG00000011407 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000011407
NamePragmin
Descriptionpragma of Rnd2 [Source:RGD Symbol;Acc:1311793]
OrganismRattus norvegicus (rat)
Synonym(s)loc306506, rgd1311793, rgd1311793_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
8.32e3
  • 8.32e3
68.91858
  • 68.91858
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
66.94664
  • 66.94664
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.01e3
  • 9.01e3
66.33328
  • 66.33328
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
60.50265
  • 60.50265
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
54.83201
  • 54.83201
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
53.82286
  • 53.82286
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
51.81430
  • 51.81430
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
45.80268
  • 45.80268
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
25.73659
  • 25.73659
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07026025, AABR07026026, CH473970
EnsemblENSRNOG00000011407 (Pragmin)
RGD1311793 (Pragmin)
Uniprot/SPTREMBLD3ZMK9, D3ZMK9_RAT

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