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R. norvegicus Gene: Rrnad1 - ENSRNOG00000011645 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000011645
NameRrnad1
Descriptionribosomal RNA adenine dimethylase domain containing 1 [Source:RGD Symbol;Acc:1311265]
OrganismRattus norvegicus (rat)
Synonym(s)loc361976, rgd1311265
Orthologs(s)27 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
  • 2.26e4
73.50
  • 73.50
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.53e3
  • 8.53e3
68.93
  • 68.93
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.99e3
  • 8.99e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
9.15e3
  • 9.15e3
  • 9.39e3
  • 9.44e3
66.69
  • 66.69
  • 65.79
  • 65.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.33e3
  • 9.33e3
66.01
  • 66.01
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.43e3
  • 9.43e3
  • 9.67e3
65.67
  • 65.67
  • 64.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.53
  • 65.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
65.42
  • 65.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
64.64
  • 64.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.92e3
  • 9.92e3
63.85
  • 63.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.65
  • 62.65
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.41
  • 62.41
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.32
  • 61.32
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.87
  • 60.87
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
60.08
  • 60.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000011645.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000011645.

Cross-references

EnsemblENSRNOG00000011645 (Rrnad1)
RGD1311265 (Rrnad1)
EMBLBC079059
Uniprot/SWISSPROTQ6AYG0, RRNAD_RAT

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