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R. norvegicus Gene: Slc39a10 - ENSRNOG00000011677 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000011677
NameSlc39a10
Descriptionsolute carrier family 39 (zinc transporter), member 10 [Source:RGD Symbol;Acc:1307321]
OrganismRattus norvegicus (rat)
Synonym(s)loc363229, slc39a10_predicted
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e3
  • 1.48e3
  • 1.71e3
94.63
  • 94.63
  • 93.77
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
2.64e3
  • 2.64e3
  • 2.94e3
90.39
  • 90.39
  • 89.30
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.46e3
  • 4.46e3
83.74
  • 83.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.99e3
  • 5.99e3
  • 7.18e3
78.20
  • 78.20
  • 73.84
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.29e3
  • 6.29e3
77.10
  • 77.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.68e3
  • 6.68e3
75.68
  • 75.68
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
75.02
  • 75.02
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.66e3
  • 7.66e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.20e3
  • 8.20e3
70.13
  • 70.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.23e3
  • 8.23e3
70.02
  • 70.02
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.34e3
  • 8.34e3
69.63
  • 69.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.40e3
  • 8.40e3
69.39
  • 69.39
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.52e3
  • 8.52e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.75e3
  • 8.75e3
68.12
  • 68.12
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.05e3
  • 9.05e3
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.31e3
  • 9.31e3
66.09
  • 66.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.26
  • 63.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
1.10e4
  • 1.10e4
  • 1.13e4
  • 1.21e4
59.86
  • 59.86
  • 58.94
  • 56.08
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000011677.

Cross-references

EnsemblENSRNOG00000011677 (Slc39a10)
RGD1307321 (Slc39a10)
EMBLAABR07067736, CH473965
Uniprot/SPTREMBLD4A517, D4A517_RAT

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