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R. norvegicus Gene: AABR07026997.1 - ENSRNOG00000011955 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000011955
NameAABR07026997.1
Description-
OrganismRattus norvegicus (rat)
Orthologs(s)26 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.00e3
  • 1.00e3
96.35
  • 96.35
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.28e3
  • 2.28e3
91.71
  • 91.71
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.13e3
  • 4.13e3
84.97
  • 84.97
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.70e3
  • 5.70e3
  • 1.73e4
79.24
  • 79.24
  • 37.02
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.06e3
  • 7.06e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.27
  • 57.27
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.24
  • 49.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
40.04
  • 40.04
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
38.88
  • 38.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
  • 2.26e4
38.28
  • 38.28
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.74e4
  • 1.74e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
  • 1.86e4
32.69
  • 32.69
  • 32.11
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
30.88
  • 30.88
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.27
  • 29.27
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.69
  • 28.69
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
26.34
  • 26.34
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.07e4
  • 2.07e4
24.70
  • 24.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species2 genesCompare expression
Rodentia2 species4 genesCompare expression
Glires3 species5 genesCompare expression
Euarchontoglires7 species15 genesCompare expression
Amniota9 species17 genesCompare expression
Tetrapoda10 species18 genesCompare expression
Euteleostomi11 species19 genesCompare expression
Bilateria18 species26 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000011955.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression
Theria2 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000011955.

Cross-references

EnsemblENSRNOG00000011955 (AABR07026997.1)
EMBLAABR07026997
Uniprot/SPTREMBLA0A0H2UHJ3, A0A0H2UHJ3_RAT

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