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R. norvegicus Gene: Mpdu1 - ENSRNOG00000012162 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000012162
NameMpdu1
Descriptionmannose-P-dolichol utilization defect 1 [Source:RGD Symbol;Acc:1307699]
OrganismRattus norvegicus (rat)
Synonym(s)loc303244
Orthologs(s)21 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
95.04
  • 95.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
  • 1.95e3
  • 2.35e3
94.94
  • 94.94
  • 92.88
  • 91.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
94.50
  • 94.50
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
93.92
  • 93.92
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.79e3
  • 1.79e3
93.47
  • 93.47
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.91e3
  • 1.91e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.91e3
  • 1.91e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
92.37
  • 92.37
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.29e3
  • 2.29e3
91.64
  • 91.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.75e3
  • 2.75e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.85e3
  • 2.85e3
89.63
  • 89.63
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.91e3
  • 2.91e3
  • 3.04e3
89.41
  • 89.41
  • 88.92
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
88.71
  • 88.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.26e3
  • 3.26e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.27e3
  • 3.27e3
88.07
  • 88.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.07e3
  • 4.07e3
85.19
  • 85.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.54e3
  • 4.54e3
  • 8.20e3
83.47
  • 83.47
  • 70.13
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000012162.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000012162.

Cross-references

EnsemblENSRNOG00000012162 (Mpdu1)
RGD1307699 (Mpdu1)
EMBLAABR06064390, CH473948
Uniprot/SPTREMBLD3Z865, D3Z865_RAT

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