R. norvegicus Gene: Agmat - ENSRNOG00000012315 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000012315
NameAgmat
Descriptionagmatine ureohydrolase (agmatinase) [Source:RGD Symbol;Acc:1308424]
OrganismRattus norvegicus (rat)
Synonym(s)auh, loc298607, q5bk25

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.00e3
  • 1.00e3
  • 1.28e3
96.34789
  • 96.34789
  • 95.33738
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.22763
  • 96.22763
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.22595
  • 96.22595
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.74e3
  • 3.74e3
86.37736
  • 86.37736
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
82.35193
  • 82.35193
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.94e3
  • 7.94e3
71.05300
  • 71.05300
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.43976
  • 55.43976
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.53372
  • 51.53372
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.81712
  • 50.81712
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.60707
  • 50.60707
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
50.46894
  • 50.46894
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.30401
  • 44.30401
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.50137
  • 43.50137
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
42.98435
  • 42.98435
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.50334
  • 42.50334
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
41.87862
  • 41.87862
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.64e4
40.40781
  • 40.40781
  • 40.16687
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.23719
  • 40.23719
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.01393
  • 39.01393
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
  • 2.26e4
38.19160
  • 38.19160
  • 17.62593
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC091231, BC105628
EnsemblENSRNOG00000012315 (Agmat)
RGD1308424 (Agmat)
Uniprot/SWISSPROTQ0D2L3, SPEB_RAT

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