R. norvegicus Gene: Agmat - ENSRNOG00000012315 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000012315
NameAgmat
Descriptionagmatine ureohydrolase (agmatinase) [Source:RGD Symbol;Acc:1308424]
OrganismRattus norvegicus (rat)
Synonym(s)auh, loc298607, q5bk25

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.13421
  • 96.13421
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.12341
  • 96.12341
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.07114
  • 56.07114
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
49.26498
  • 49.26498
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
42.94698
  • 42.94698
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
42.10880
  • 42.10880
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
40.46828
  • 40.46828
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
37.27552
  • 37.27552
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.74e4
  • 1.74e4
34.93607
  • 34.93607
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC091231, BC105628
EnsemblENSRNOG00000012315 (Agmat)
RGD1308424 (Agmat)
Uniprot/SWISSPROTQ0D2L3, SPEB_RAT

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