R. norvegicus Gene: Barhl1 - ENSRNOG00000013209 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013209
NameBarhl1
DescriptionBarH-like homeobox 1 [Source:RGD Symbol;Acc:620648]
OrganismRattus norvegicus (rat)
Synonym(s)barhl2, mbh2, q9jk26

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.28
  • 58.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
1.50e4
  • 1.50e4
45.16
  • 45.16
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.10
  • 36.10
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
28.11
  • 28.11
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.31
  • 27.31
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
26.99
  • 26.99
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.09e4
  • 2.09e4
23.62
  • 23.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAB043981
EnsemblENSRNOG00000013209 (Barhl1)
RGD620648 (Barhl1)
Uniprot/SWISSPROTBARH1_RAT, P63156

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