R. norvegicus Gene: Cdhr1 - ENSRNOG00000013330 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013330
NameCdhr1
Descriptioncadherin-related family member 1 [Source:RGD Symbol;Acc:620420]
OrganismRattus norvegicus (rat)
Synonym(s)kiaa1775, pcdh21, prcad

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
61.01536
  • 61.01536
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
54.75127
  • 54.75127
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
46.41145
  • 46.41145
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
46.27126
  • 46.27126
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
46.12498
  • 46.12498
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
  • 1.65e4
38.78262
  • 38.78262
  • 38.46181
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.80e4
  • 1.80e4
32.91802
  • 32.91802
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
31.29230
  • 31.29230
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
30.42550
  • 30.42550
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.89e4
  • 1.89e4
29.38881
  • 29.38881
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAB053449
EnsemblENSRNOG00000013330 (Cdhr1)
RGD620420 (Cdhr1)
Uniprot/SWISSPROTCDHR1_RAT, Q91XU7

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