R. norvegicus Gene: Cdhr1 - ENSRNOG00000013330 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013330
NameCdhr1
Descriptioncadherin-related family member 1 [Source:RGD Symbol;Acc:620420]
OrganismRattus norvegicus (rat)
Synonym(s)kiaa1775, pcdh21, prcad

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 9.85e3
73.01484
  • 73.01484
  • 64.09297
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.99e3
  • 7.99e3
70.86231
  • 70.86231
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.33869
  • 60.33869
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.76526
  • 52.76526
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.85e4
50.01277
  • 50.01277
  • 32.61659
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.54112
  • 47.54112
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.39982
  • 47.39982
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.81256
  • 45.81256
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.51311
  • 45.51311
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.67837
  • 43.67837
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.40245
  • 43.40245
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.38779
  • 40.38779
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
  • 1.68e4
39.07616
  • 39.07616
  • 38.75694
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.23504
  • 38.23504
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.81490
  • 37.81490
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.81e4
  • 1.81e4
33.97326
  • 33.97326
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.51891
  • 32.51891
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
32.33840
  • 32.33840
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAB053449
EnsemblENSRNOG00000013330 (Cdhr1)
RGD620420 (Cdhr1)
Uniprot/SWISSPROTCDHR1_RAT, Q91XU7

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