R. norvegicus Gene: Slc6a12 - ENSRNOG00000013547 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013547
NameSlc6a12
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 12 [Source:RGD Symbol;Acc:620255]
OrganismRattus norvegicus (rat)
Synonym(s)bgt1, gat1, rnu28927, vgat

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.27e3
  • 3.27e3
  • 4.00e3
88.08382
  • 88.08382
  • 85.42955
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.10669
  • 61.10669
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.61185
  • 60.61185
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
  • 1.70e4
56.33001
  • 56.33001
  • 37.89007
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.43677
  • 55.43677
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
50.35277
  • 50.35277
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.40927
  • 48.40927
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.53773
  • 47.53773
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.12434
  • 47.12434
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
45.05978
  • 45.05978
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.30022
  • 42.30022
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
  • 1.60e4
42.17544
  • 42.17544
  • 41.68771
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.28139
  • 39.28139
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.15140
  • 39.15140
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.98581
  • 36.98581
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.03822
  • 36.03822
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.85731
  • 35.85731
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.65463
  • 32.65463
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.31674
  • 31.31674
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07061928, CH473964, U28927
EnsemblENSRNOG00000013547 (Slc6a12)
RGD620255 (Slc6a12)
Uniprot/SPTREMBLA0A0G2JSN3, A0A0G2JSN3_RAT
Uniprot/SWISSPROTP48056, S6A12_RAT

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