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R. norvegicus Gene: Med20 - ENSRNOG00000013852 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013852
NameMed20
Descriptionmediator complex subunit 20 [Source:RGD Symbol;Acc:1306415]
OrganismRattus norvegicus (rat)
Synonym(s)loc100360472, loc316209, trfp, usp49
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
  • 4.21e3
  • 4.96e3
89.03
  • 89.03
  • 84.66
  • 81.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.70e3
  • 3.70e3
86.53
  • 86.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.19e3
  • 4.19e3
  • 6.47e3
84.74
  • 84.74
  • 76.42
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.22e3
  • 4.22e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.67e3
  • 4.67e3
82.99
  • 82.99
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.76e3
  • 4.76e3
82.65
  • 82.65
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.00e3
  • 5.00e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.55e3
  • 5.55e3
79.79
  • 79.79
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.66e3
  • 5.66e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.69e3
  • 5.69e3
  • 7.81e3
79.29
  • 79.29
  • 71.53
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.69e3
  • 5.69e3
79.29
  • 79.29
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.80e3
  • 5.80e3
78.88
  • 78.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.02e3
  • 6.02e3
78.08
  • 78.08
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.02e3
  • 6.02e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
  • 7.73e3
75.71
  • 75.71
  • 71.86
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
73.02
  • 73.02
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.37e4
50.14
  • 50.14
  • 49.98
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species2 genesCompare expression
Rodentia2 species3 genesCompare expression
Glires3 species4 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000013852.

Cross-references

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