R. norvegicus Gene: Bpifa1 - ENSRNOG00000013859 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013859
NameBpifa1
DescriptionBPI fold containing family A, member 1 [Source:RGD Symbol;Acc:619818]
OrganismRattus norvegicus (rat)
Synonym(s)plunc
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
  • 1.62e4
62.56
  • 62.56
  • 40.87
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.35
  • 60.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
  • 1.95e4
57.45
  • 57.45
  • 28.87
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.08
  • 42.08
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.59
  • 31.59
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
25.10
  • 25.10
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
20.78
  • 20.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.36e4
  • 2.36e4
14.09
  • 14.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species15 genesCompare expression
Mammalia14 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000013859.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eutheria1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000013859.

Cross-references

EnsemblENSRNOG00000013859 (Bpifa1)
RGD619818 (Bpifa1)
EMBLAF393750
Uniprot/SWISSPROTBPIA1_RAT, Q8K4I4

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