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R. norvegicus Gene: LOC100360522 - ENSRNOG00000013874 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013874
NameLOC100360522
Descriptionribosomal protein P1-like [Source:RGD Symbol;Acc:2321935]
OrganismRattus norvegicus (rat)
Synonym(s)mgc72935
Orthologs(s)26 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.69
  • 9.69
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
15.0
  • 15.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
22.1
  • 22.1
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
30.3
  • 30.3
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
33.0
  • 33.0
  • 67.4
99.88
  • 99.88
  • 99.76
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
33.3
  • 33.3
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
33.7
  • 33.7
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
38.4
  • 38.4
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
39.4
  • 39.4
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
40.4
  • 40.4
  • 47.0
99.86
  • 99.86
  • 99.83
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
41.4
  • 41.4
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
42.0
  • 42.0
  • 148
99.85
  • 99.85
  • 99.46
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
46.7
  • 46.7
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
60.3
  • 60.3
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
67.7
  • 67.7
99.76
  • 99.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
77.8
  • 77.8
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
82.6
  • 82.6
  • 91.4
  • 153
99.70
  • 99.70
  • 99.67
  • 99.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
85.6
  • 85.6
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
86.8
  • 86.8
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
87.3
  • 87.3
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
93.5
  • 93.5
99.66
  • 99.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species2 genesCompare expression
Rodentia2 species4 genesCompare expression
Glires3 species5 genesCompare expression
Euarchontoglires7 species15 genesCompare expression
Amniota9 species17 genesCompare expression
Tetrapoda10 species18 genesCompare expression
Euteleostomi11 species19 genesCompare expression
Bilateria18 species26 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000013874.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression
Theria2 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000013874.

Cross-references

EnsemblENSRNOG00000013874 (LOC100360522)
RGD2321935 (LOC100360522), 621774 (Rplp1)
EMBLBC058151, X15097
Uniprot/SWISSPROTP19944, RLA1_RAT

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