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R. norvegicus Gene: Med27 - ENSRNOG00000013933 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013933
NameMed27
Descriptionmediator complex subunit 27 [Source:RGD Symbol;Acc:1564993]
OrganismRattus norvegicus (rat)
Synonym(s)loc296612, rgd1564993, rgd1564993_predicted
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.60e3
  • 2.60e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.33e3
  • 3.33e3
  • 6.34e3
87.86
  • 87.86
  • 76.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.71e3
  • 3.71e3
  • 4.15e3
86.47
  • 86.47
  • 84.89
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.80e3
  • 4.80e3
82.53
  • 82.53
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.05e3
  • 5.05e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.27e3
  • 5.27e3
80.81
  • 80.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.29e3
  • 5.29e3
80.74
  • 80.74
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.47e3
  • 5.47e3
80.06
  • 80.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
78.59
  • 78.59
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.94e3
  • 5.94e3
  • 6.06e3
78.37
  • 78.37
  • 77.93
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.24e3
  • 6.24e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.26e3
  • 6.26e3
77.19
  • 77.19
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
75.34
  • 75.34
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
74.61
  • 74.61
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.09e3
  • 7.09e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.10e3
  • 7.10e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.23e3
  • 7.23e3
73.66
  • 73.66
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
7.59e3
  • 7.59e3
  • 8.37e3
  • 8.56e3
72.34
  • 72.34
  • 69.50
  • 68.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.71e3
  • 7.71e3
71.90
  • 71.90
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.28e3
  • 8.28e3
69.84
  • 69.84
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.06e4
61.73
  • 61.73
  • 61.34
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000013933.

Cross-references

EnsemblENSRNOG00000013933 (Med27)
RGD1564993 (Med27)
EMBLAABR07051386, BC167032, CH474001
Uniprot/SPTREMBLB2RZ56, B2RZ56_RAT

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