R. norvegicus Gene: Idh2 - ENSRNOG00000013949 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000013949
NameIdh2
Descriptionisocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:RGD Symbol;Acc:1597139]
OrganismRattus norvegicus (rat)
Synonym(s)icd-m, idh, idp, loc361596, q6dgf1
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
55.8
  • 55.8
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
174
  • 174
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
259
  • 259
99.06
  • 99.06
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
297
  • 297
98.92
  • 98.92
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
333
  • 333
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
350
  • 350
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
828
  • 828
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
897
  • 897
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
999
  • 999
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.08e3
  • 1.08e3
96.08
  • 96.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.46e3
  • 1.46e3
  • 1.51e3
  • 1.94e3
94.68
  • 94.68
  • 94.50
  • 92.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.76e3
  • 1.76e3
93.58
  • 93.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.90e3
  • 1.90e3
93.08
  • 93.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.57e3
  • 2.57e3
  • 2.82e3
90.63
  • 90.63
  • 89.73
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.63e3
  • 4.63e3
  • 4.86e3
83.13
  • 83.13
  • 82.29
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.92e3
  • 9.92e3
  • 1.20e4
63.87
  • 63.87
  • 56.20
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000013949.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000013949.

Cross-references

EnsemblENSRNOG00000013949 (Idh2)
RGD1597139 (Idh2)
EMBLAABR07004419, BC076398
Uniprot/SPTREMBLA0A0G2JUF6, A0A0G2JUF6_RAT
Uniprot/SWISSPROTIDHP_RAT, P56574

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