R. norvegicus Gene: Hmox1 - ENSRNOG00000014117 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000014117
NameHmox1
Descriptionheme oxygenase 1 [Source:RGD Symbol;Acc:2806]
OrganismRattus norvegicus (rat)
Synonym(s)heox, heoxg, hmox, ho-1, ho1, hsp32, q5bk87
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
181
  • 181
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.64e3
  • 1.64e3
94.04
  • 94.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.24e3
  • 2.24e3
  • 3.99e3
  • 4.40e3
91.83
  • 91.83
  • 85.48
  • 83.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
89.22
  • 89.22
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.06e3
  • 3.06e3
88.86
  • 88.86
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.13e3
  • 3.13e3
88.60
  • 88.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
88.04
  • 88.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.17e3
  • 4.17e3
  • 4.58e3
84.81
  • 84.81
  • 83.33
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.30e3
  • 4.30e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
81.46
  • 81.46
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.72e3
  • 5.72e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.32e3
  • 6.32e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.49e3
  • 6.49e3
76.36
  • 76.36
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.91e3
  • 8.91e3
67.54
  • 67.54
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.29e3
  • 9.29e3
  • 1.16e4
66.16
  • 66.16
  • 57.67
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.77e3
  • 9.77e3
64.42
  • 64.42
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
62.12
  • 62.12
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.18e4
60.29
  • 60.29
  • 57.02
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.85
  • 39.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000014117.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000014117.

Cross-references

EnsemblENSRNOG00000014117 (Hmox1)
RGD2806 (Hmox1)
EMBLBC091164, J02722
Uniprot/SWISSPROTHMOX1_RAT, P06762

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