R. norvegicus Gene: Slc31a1 - ENSRNOG00000014475 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000014475
NameSlc31a1
Descriptionsolute carrier family 31 (copper transporter), member 1 [Source:RGD Symbol;Acc:620059]
OrganismRattus norvegicus (rat)
Synonym(s)copt1, ctr1, lrrgt00200, q53yn6, rctr1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
499
  • 499
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
529
  • 529
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
880
  • 880
  • 1.08e3
96.80
  • 96.80
  • 96.08
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
95.92
  • 95.92
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.71e3
  • 2.71e3
90.11
  • 90.11
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.87e3
  • 2.87e3
89.55
  • 89.55
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.60e3
  • 3.60e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
78.81
  • 78.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.84e3
  • 5.84e3
78.69
  • 78.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.06e3
  • 6.06e3
  • 6.58e3
77.88
  • 77.88
  • 76.02
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.08e3
  • 6.08e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.43e3
  • 6.43e3
76.56
  • 76.56
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
76.21
  • 76.21
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.09e3
  • 7.09e3
74.13
  • 74.13
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
  • 8.05e3
72.24
  • 72.24
  • 70.65
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.86e3
  • 7.86e3
71.35
  • 71.35
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
  • 1.67e4
39.17
  • 39.17
  • 39.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAF268030, AY539951, BC078745
EnsemblENSRNOG00000014475 (Slc31a1)
RGD620059 (Slc31a1)
Uniprot/SWISSPROTCOPT1_RAT, Q9JK41

Do not show this banner again