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R. norvegicus Gene: Pgc - ENSRNOG00000014492 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000014492
NamePgc
Descriptionprogastricsin (pepsinogen C) [Source:RGD Symbol;Acc:3943]
OrganismRattus norvegicus (rat)
Synonym(s)pg-1, pg1, upg1
Orthologs(s)14 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.00
  • 1.00
100.00
  • 100.00
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.69e3
  • 1.69e3
93.84
  • 93.84
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
81.30
  • 81.30
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.79e3
  • 5.79e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.14e3
  • 6.14e3
77.62
  • 77.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.98e3
  • 8.98e3
  • 1.59e4
67.28
  • 67.28
  • 42.24
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.39e3
  • 9.39e3
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.72e3
  • 9.72e3
64.59
  • 64.59
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.96e4
47.76
  • 47.76
  • 28.72
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.71
  • 45.71
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 2.05e4
41.86
  • 41.86
  • 25.42
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.76
  • 39.76
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.03
  • 38.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.68
  • 28.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.09e4
  • 2.09e4
23.75
  • 23.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Amniota13 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000014492.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta4 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000014492.

Cross-references

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