R. norvegicus Gene: Vapa - ENSRNOG00000014765 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000014765
NameVapa
DescriptionVAMP (vesicle-associated membrane protein)-associated protein A [Source:RGD Symbol;Acc:61803]
OrganismRattus norvegicus (rat)
Synonym(s)q6p723, vamp-a, vap-33, vap-a, vap33

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
335
  • 335
98.78178
  • 98.78178
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
471
  • 471
  • 1.15e3
98.28716
  • 98.28716
  • 95.82533
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
518
  • 518
98.11442
  • 98.11442
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
548
  • 548
98.00463
  • 98.00463
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
589
  • 589
97.85414
  • 97.85414
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
593
  • 593
  • 598
97.83970
  • 97.83970
  • 97.82328
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
801
  • 801
97.08247
  • 97.08247
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
814
  • 814
97.03589
  • 97.03589
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
824
  • 824
96.99861
  • 96.99861
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
863
  • 863
96.85633
  • 96.85633
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
866
  • 866
96.84641
  • 96.84641
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
880
  • 880
96.79567
  • 96.79567
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
891
  • 891
96.75326
  • 96.75326
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
922
  • 922
96.64212
  • 96.64212
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.01e3
  • 1.01e3
96.33563
  • 96.33563
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.10e3
  • 1.10e3
95.97447
  • 95.97447
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.96976
  • 95.96976
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.13e3
  • 1.13e3
95.88496
  • 95.88496
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
  • 1.26e3
95.44808
  • 95.44808
  • 95.42587
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.29e3
  • 1.29e3
  • 1.55e3
95.31521
  • 95.31521
  • 94.34234
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
94.93438
  • 94.93438
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07068633, AABR07068634, AF086630, BC061875
EnsemblENSRNOG00000014765 (Vapa)
RGD61803 (Vapa)
Uniprot/SPTREMBLA0A0G2K8E6, A0A0G2K8E6_RAT
Uniprot/SWISSPROTQ9Z270, VAPA_RAT

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