R. norvegicus Gene: Vapa - ENSRNOG00000014765 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000014765
NameVapa
DescriptionVAMP (vesicle-associated membrane protein)-associated protein A [Source:RGD Symbol;Acc:61803]
OrganismRattus norvegicus (rat)
Synonym(s)q6p723, vamp-a, vap-33, vap-a, vap33

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
582
  • 582
  • 586
97.82936
  • 97.82936
  • 97.81285
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
589
  • 589
97.80179
  • 97.80179
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
814
  • 814
96.96398
  • 96.96398
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
982
  • 982
96.33381
  • 96.33381
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
96.18925
  • 96.18925
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.86945
  • 95.86945
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
95.30724
  • 95.30724
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.37e3
  • 1.37e3
94.86721
  • 94.86721
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
94.81210
  • 94.81210
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07068633, AABR07068634, AF086630, BC061875
EnsemblENSRNOG00000014765 (Vapa)
RGD61803 (Vapa)
Uniprot/SPTREMBLA0A0G2K8E6, A0A0G2K8E6_RAT
Uniprot/SWISSPROTQ9Z270, VAPA_RAT

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