R. norvegicus Gene: N4bp1 - ENSRNOG00000015121 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000015121
NameN4bp1
DescriptionNedd4 binding protein 1 [Source:RGD Symbol;Acc:1305179]
OrganismRattus norvegicus (rat)
Synonym(s)loc291921, rgd1305179
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.61e3
  • 4.61e3
83.22
  • 83.22
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.19e3
  • 6.19e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.28e3
  • 6.28e3
77.14
  • 77.14
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.32e3
  • 6.32e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
75.34
  • 75.34
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.20e3
  • 7.20e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.26e3
  • 7.26e3
73.56
  • 73.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.45e3
  • 7.45e3
72.88
  • 72.88
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.13e3
  • 8.13e3
70.39
  • 70.39
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
8.21e3
  • 8.21e3
  • 8.50e3
  • 1.02e4
70.09
  • 70.09
  • 69.03
  • 63.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.54e3
  • 8.54e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.67e3
  • 8.67e3
68.42
  • 68.42
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.73e3
  • 8.73e3
  • 9.82e3
68.20
  • 68.20
  • 64.22
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.43e3
  • 9.43e3
65.65
  • 65.65
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
63.77
  • 63.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.31e4
61.48
  • 61.48
  • 52.36
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 1.67e4
39.73
  • 39.73
  • 39.29
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000015121.

Cross-references

EnsemblENSRNOG00000015121 (N4bp1)
RGD1305179 (N4bp1)
EMBLAABR07043103
Uniprot/SPTREMBLD3ZT79, D3ZT79_RAT

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