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R. norvegicus Gene: Slc9a3 - ENSRNOG00000015159 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000015159
NameSlc9a3
Descriptionsolute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 [Source:RGD Symbol;Acc:3720]
OrganismRattus norvegicus (rat)
Synonym(s)nhe-3, nhe3
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.53e3
  • 2.53e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.40e3
  • 3.40e3
87.64
  • 87.64
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.64e3
  • 3.64e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.73e3
  • 3.73e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.28e3
  • 5.28e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
68.70
  • 68.70
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.33
  • 54.33
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.95
  • 51.95
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.92
  • 50.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
44.86
  • 44.86
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.74
  • 43.74
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.55e4
  • 1.55e4
  • 1.57e4
43.63
  • 43.63
  • 42.75
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.67e4
40.45
  • 40.45
  • 39.06
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.97e4
  • 1.97e4
28.10
  • 28.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000015159.

Cross-references

EnsemblENSRNOG00000015159 (Slc9a3)
RGD3720 (Slc9a3)
EMBLAC094921, CH474002
Uniprot/SPTREMBLG3V7Y7, G3V7Y7_RAT

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