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R. norvegicus Gene: Nt5c1a - ENSRNOG00000015283 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000015283
NameNt5c1a
Description5'-nucleotidase, cytosolic IA [Source:RGD Symbol;Acc:1310908]
OrganismRattus norvegicus (rat)
Synonym(s)loc313574, nt5c1a_predicted
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.97e3
  • 1.97e3
92.84
  • 92.84
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
92.28
  • 92.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.63e3
  • 8.63e3
68.56
  • 68.56
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
64.68
  • 64.68
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.28e4
61.22
  • 61.22
  • 53.39
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 2.21e4
57.97
  • 57.97
  • 19.54
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.06
  • 57.06
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
46.29
  • 46.29
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.97
  • 43.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.69
  • 43.69
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
40.81
  • 40.81
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.55
  • 38.55
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.12
  • 38.12
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.80
  • 37.80
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.57
  • 37.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.47
  • 37.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.82e4
  • 1.82e4
  • 2.26e4
33.76
  • 33.76
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
  • 2.04e4
33.64
  • 33.64
  • 25.65
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000015283.

Cross-references

EnsemblENSRNOG00000015283 (Nt5c1a)
RGD1310908 (Nt5c1a)
EMBLAABR07073151, CH473968
Uniprot/SPTREMBLD3ZVD3, D3ZVD3_RAT

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