R. norvegicus Gene: Stx7 - ENSRNOG00000015670 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000015670
NameStx7
Descriptionsyntaxin 7 [Source:RGD Symbol;Acc:619747]
OrganismRattus norvegicus (rat)
Synonym(s)q5u337
Orthologs(s)25 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
863
  • 863
  • 864
96.86
  • 96.86
  • 96.86
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
  • 1.93e3
96.14
  • 96.14
  • 92.97
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.46e3
  • 1.46e3
94.70
  • 94.70
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
93.65
  • 93.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
92.03
  • 92.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
90.82
  • 90.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
89.71
  • 89.71
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.92e3
  • 2.92e3
89.35
  • 89.35
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.27e3
  • 3.27e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
3.51e3
  • 3.51e3
  • 3.85e3
  • 4.58e3
87.21
  • 87.21
  • 85.99
  • 83.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.52e3
  • 3.52e3
87.16
  • 87.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.30e3
  • 4.30e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
  • 1.04e4
73.61
  • 73.61
  • 62.01
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000015670.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression
Chordata2 genesCompare expression
Eumetazoa6 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000015670.

Cross-references

EnsemblENSRNOG00000015670 (Stx7)
RGD619747 (Stx7)
EMBLAABR07071852, AF031430, BC085737
Uniprot/SPTREMBLA0A0G2K6Y9, A0A0G2K6Y9_RAT
Uniprot/SWISSPROTO70257, STX7_RAT

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