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R. norvegicus Gene: Gnmt - ENSRNOG00000016349 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000016349
NameGnmt
Descriptionglycine N-methyltransferase [Source:RGD Symbol;Acc:2719]
OrganismRattus norvegicus (rat)
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
208
  • 208
  • 334
  • 355
99.25
  • 99.25
  • 98.79
  • 98.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.81e3
  • 2.81e3
89.77
  • 89.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.29e3
  • 3.29e3
88.00
  • 88.00
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.30e3
  • 8.30e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
33.15
  • 33.15
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.64
  • 31.64
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.02e4
  • 2.02e4
  • 2.48e4
26.35
  • 26.35
  • 9.65
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
24.80
  • 24.80
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.34
  • 23.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
20.87
  • 20.87
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
18.54
  • 18.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000016349.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000016349.

Cross-references

EnsemblENSRNOG00000016349 (Gnmt)
RGD2719 (Gnmt)
EMBLX06150, X07833
Uniprot/SWISSPROTGNMT_RAT, P13255

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