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R. norvegicus Gene: Eif3j - ENSRNOG00000016459 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000016459
NameEif3j
Descriptioneukaryotic translation initiation factor 3, subunit J [Source:RGD Symbol;Acc:1593338]
OrganismRattus norvegicus (rat)
Synonym(s)eif3s1, loc311371, loc691947, mgc156679
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
509
  • 509
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
705
  • 705
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
967
  • 967
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
995
  • 995
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.06e3
  • 1.06e3
96.13
  • 96.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
  • 3.53e3
95.13
  • 95.13
  • 87.14
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
94.64
  • 94.64
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.54
  • 94.54
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.53e3
  • 1.53e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.53e3
  • 1.53e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.60e3
  • 1.60e3
94.16
  • 94.16
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.81e3
  • 1.81e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 3.84e3
93.22
  • 93.22
  • 86.03
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.92e3
  • 1.92e3
93.00
  • 93.00
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.93e3
  • 1.93e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
1.97e3
  • 1.97e3
  • 2.03e3
  • 2.05e3
92.81
  • 92.81
  • 92.60
  • 92.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
92.27
  • 92.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.18e3
  • 2.18e3
92.05
  • 92.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.27e3
  • 2.27e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.66e3
  • 4.66e3
  • 4.68e3
83.04
  • 83.04
  • 82.95
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species2 genesCompare expression
Glires2 species3 genesCompare expression
Euarchontoglires5 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Mammalia12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression
Euteleostomi16 species18 genesCompare expression
Bilateria22 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000016459.

Cross-references

EnsemblENSRNOG00000016459 (Eif3j)
RGD1593338 (Eif3j)
EMBLBC127509
Uniprot/SWISSPROTA0JPM9, EIF3J_RAT

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