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R. norvegicus Gene: Actl7a - ENSRNOG00000016641 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000016641
NameActl7a
Descriptionactin-like 7a [Source:RGD Symbol;Acc:1304697]
OrganismRattus norvegicus (rat)
Synonym(s)arp7a, loc298017, t-actin 2, tact2
Orthologs(s)14 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
337
  • 337
  • 604
98.78
  • 98.78
  • 97.80
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.38e4
  • 1.38e4
  • 1.48e4
  • 1.80e4
49.86
  • 49.86
  • 46.22
  • 34.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.21
  • 49.21
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.87
  • 45.87
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.77
  • 44.77
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.63
  • 43.63
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
43.10
  • 43.10
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.63
  • 42.63
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.39
  • 41.39
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
41.00
  • 41.00
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.66
  • 40.66
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 1.84e4
39.90
  • 39.90
  • 32.92
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.82
  • 39.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.60
  • 39.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.41
  • 39.41
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.39
  • 39.39
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.28
  • 39.28
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
33.16
  • 33.16
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.38
  • 27.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000016641.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000016641.

Cross-references

EnsemblENSRNOG00000016641 (Actl7a)
RGD1304697 (Actl7a)
EMBLBC082101
Uniprot/SWISSPROTACL7A_RAT, Q641W9

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