R. norvegicus Gene: Tpm2 - ENSRNOG00000016731 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000016731
NameTpm2
Descriptiontropomyosin 2, beta [Source:RGD Symbol;Acc:1559479]
OrganismRattus norvegicus (rat)
Synonym(s)mgc109519, mgc109519 {eco:0000313|embl:edl98750.1,gn eco:0000313|rgd:1559479}, p02560, p06395

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
19.2
  • 19.2
99.93358
  • 99.93358
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
26.7
  • 26.7
99.90630
  • 99.90630
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
31.0
  • 31.0
99.89054
  • 99.89054
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
116
  • 116
99.57953
  • 99.57953
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
201
  • 201
99.27195
  • 99.27195
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
282
  • 282
98.97341
  • 98.97341
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
464
  • 464
98.31265
  • 98.31265
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
489
  • 489
98.21986
  • 98.21986
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
626
  • 626
97.72039
  • 97.72039
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.38e3
  • 1.38e3
94.95616
  • 94.95616
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.43e3
  • 1.43e3
94.78765
  • 94.78765
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
  • 6.46e3
94.26268
  • 94.26268
  • 76.44031
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.84e3
  • 1.84e3
93.28997
  • 93.28997
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.06e3
  • 2.06e3
92.50352
  • 92.50352
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.39e3
  • 3.39e3
87.65303
  • 87.65303
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.24e3
  • 4.24e3
84.55064
  • 84.55064
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.27e3
  • 4.27e3
84.44644
  • 84.44644
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
  • 6.69e3
82.75632
  • 82.75632
  • 75.61666
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.06e3
  • 5.06e3
  • 5.55e3
81.56509
  • 81.56509
  • 79.77167
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.30e3
  • 5.30e3
80.67152
  • 80.67152
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
7.83e3
  • 7.83e3
  • 8.90e3
71.43287
  • 71.43287
  • 67.55119
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

Do not show this banner again