R. norvegicus Gene: Btf3 - ENSRNOG00000016912 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000016912
NameBtf3
Descriptionbasic transcription factor 3 [Source:RGD Symbol;Acc:1308095]
OrganismRattus norvegicus (rat)
Synonym(s)loc294680, mgc106007
Orthologs(s)28 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
169
  • 169
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
186
  • 186
99.33
  • 99.33
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
241
  • 241
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
257
  • 257
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
269
  • 269
99.02
  • 99.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
290
  • 290
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
304
  • 304
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
319
  • 319
98.84
  • 98.84
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
321
  • 321
98.84
  • 98.84
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
343
  • 343
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
361
  • 361
  • 904
98.69
  • 98.69
  • 96.71
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
370
  • 370
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
374
  • 374
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
411
  • 411
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
413
  • 413
  • 1.14e4
98.50
  • 98.50
  • 58.48
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
438
  • 438
98.41
  • 98.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
568
  • 568
  • 685
  • 786
97.94
  • 97.94
  • 97.51
  • 97.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
570
  • 570
97.93
  • 97.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
598
  • 598
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
599
  • 599
97.82
  • 97.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria12 species14 genesCompare expression
Theria13 species15 genesCompare expression
Mammalia14 species16 genesCompare expression
Amniota16 species19 genesCompare expression
Tetrapoda17 species20 genesCompare expression
Euteleostomi18 species21 genesCompare expression
Bilateria25 species28 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000016912.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria5 genesCompare expression
Opisthokonta6 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000016912.

Cross-references

EnsemblENSRNOG00000016912 (Btf3)
RGD1308095 (Btf3)
EMBLAC119356, BC085343, CH473955
Uniprot/SPTREMBLQ5U3Y8, Q5U3Y8_RAT

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