R. norvegicus Gene: Tdrd1 - ENSRNOG00000017064 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017064
NameTdrd1
Descriptiontudor domain containing 1 [Source:RGD Symbol;Acc:1306140]
OrganismRattus norvegicus (rat)
Synonym(s)loc292129, tdrd1_predicted
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.90e3
  • 1.90e3
  • 2.01e3
93.07
  • 93.07
  • 92.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
1.08e4
  • 1.08e4
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.82e4
55.69
  • 55.69
  • 33.79
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.26
  • 54.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.25
  • 48.25
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.97
  • 39.97
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.87
  • 36.87
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.81
  • 36.81
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
  • 1.77e4
36.17
  • 36.17
  • 35.54
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
36.02
  • 36.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.14
  • 35.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.04
  • 35.04
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.90
  • 34.90
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
29.07
  • 29.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000017064.

Cross-references

EnsemblENSRNOG00000017064 (Tdrd1)
RGD1306140 (Tdrd1)
EMBLAABR07007027, CH473986
Uniprot/SPTREMBLD4A3N0, D4A3N0_RAT

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