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R. norvegicus Gene: Rpl28 - ENSRNOG00000017127 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017127
NameRpl28
Descriptionribosomal protein L28 [Source:RGD Symbol;Acc:621193]
OrganismRattus norvegicus (rat)
Synonym(s)loc100362069 {eco:0000313|ensembl:ensrnop00000055726,gn eco:0000313|rgd:2318912}
Orthologs(s)24 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
106
  • 106
  • 1.61e3
99.62
  • 99.62
  • 94.15
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
216
  • 216
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
225
  • 225
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
294
  • 294
  • 1.89e3
98.93
  • 98.93
  • 93.12
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
339
  • 339
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
472
  • 472
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
478
  • 478
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
496
  • 496
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
579
  • 579
97.89
  • 97.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
642
  • 642
97.67
  • 97.67
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
723
  • 723
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
737
  • 737
  • 1.47e3
  • 1.49e3
97.32
  • 97.32
  • 94.66
  • 94.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
791
  • 791
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
797
  • 797
97.10
  • 97.10
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
902
  • 902
  • 1.21e3
96.72
  • 96.72
  • 95.59
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
935
  • 935
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
96.25
  • 96.25
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.13e3
  • 1.13e3
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.17e3
  • 1.17e3
95.73
  • 95.73
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.20e3
  • 1.20e3
95.65
  • 95.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species3 genesCompare expression
Glires3 species4 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria11 species13 genesCompare expression
Theria12 species14 genesCompare expression
Amniota13 species15 genesCompare expression
Tetrapoda14 species16 genesCompare expression
Euteleostomi15 species17 genesCompare expression
Bilateria22 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000017127.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression
Eutheria2 genesCompare expression
Tetrapoda3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000017127.

Cross-references

EnsemblENSRNOG00000017127 (Rpl28)
RGD621193 (Rpl28)
EMBLAABR07071876, BC081800, CH474075
Uniprot/SPTREMBLQ642E2, Q642E2_RAT

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