R. norvegicus Gene: Tpm3 - ENSRNOG00000017441 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017441
NameTpm3
Descriptiontropomyosin 3 [Source:RGD Symbol;Acc:621546]
OrganismRattus norvegicus (rat)
Synonym(s)q63599, q63600, q63601, tm30nm, tpm-5, tpm5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
275
  • 275
98.97515
  • 98.97515
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
324
  • 324
98.79472
  • 98.79472
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
404
  • 404
98.49342
  • 98.49342
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
843
  • 843
96.85522
  • 96.85522
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
941
  • 941
96.48958
  • 96.48958
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
96.20352
  • 96.20352
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.12722
  • 94.12722
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.59e3
  • 1.59e3
94.07420
  • 94.07420
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.70e3
  • 1.70e3
93.66653
  • 93.66653
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.93e3
  • 2.93e3
  • 2.95e3
89.05930
  • 89.05930
  • 88.97145
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLL24775, L24776, L24777, X72859
EnsemblENSRNOG00000017441 (Tpm3)
RGD621546 (Tpm3)
Uniprot/SWISSPROTQ63610, TPM3_RAT

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