R. norvegicus Gene: Tpm3 - ENSRNOG00000017441 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017441
NameTpm3
Descriptiontropomyosin 3 [Source:RGD Symbol;Acc:621546]
OrganismRattus norvegicus (rat)
Synonym(s)q63599, q63600, q63601, tm30nm, tpm-5, tpm5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
275
  • 275
98.99942
  • 98.99942
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
324
  • 324
98.82325
  • 98.82325
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
365
  • 365
98.67239
  • 98.67239
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
397
  • 397
98.55444
  • 98.55444
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
463
  • 463
98.31393
  • 98.31393
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
560
  • 560
97.96050
  • 97.96050
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
632
  • 632
97.69971
  • 97.69971
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
679
  • 679
97.52628
  • 97.52628
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
701
  • 701
97.44684
  • 97.44684
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
725
  • 725
  • 952
97.36083
  • 97.36083
  • 96.53109
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
976
  • 976
96.44556
  • 96.44556
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.11e3
  • 1.11e3
  • 1.42e3
95.95076
  • 95.95076
  • 94.81344
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.16e3
  • 1.16e3
95.77481
  • 95.77481
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
95.09888
  • 95.09888
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.26772
  • 94.26772
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.75e3
  • 1.75e3
  • 1.90e3
93.62567
  • 93.62567
  • 93.07094
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
92.26465
  • 92.26465
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.23e3
  • 2.23e3
91.85994
  • 91.85994
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.34e3
  • 2.34e3
91.46537
  • 91.46537
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.88e3
  • 2.88e3
  • 2.93e3
89.51257
  • 89.51257
  • 89.31156
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLL24775, L24776, L24777, X72859
EnsemblENSRNOG00000017441 (Tpm3)
RGD621546 (Tpm3)
Uniprot/SWISSPROTQ63610, TPM3_RAT

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