R. norvegicus Gene: Gja5 - ENSRNOG00000017484 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017484
NameGja5
Descriptiongap junction protein, alpha 5 [Source:RGD Symbol;Acc:2692]
OrganismRattus norvegicus (rat)
Synonym(s)cx40, cxn-40
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
87.99
  • 87.99
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.21e3
  • 9.21e3
66.46
  • 66.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.55e3
  • 9.55e3
65.22
  • 65.22
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.91
  • 61.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.06e4
  • 1.06e4
  • 1.29e4
  • 1.36e4
61.45
  • 61.45
  • 52.91
  • 50.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.99
  • 51.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.50
  • 49.50
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.93
  • 47.93
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.86
  • 45.86
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.70e4
44.32
  • 44.32
  • 37.95
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.82
  • 43.82
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.44
  • 43.44
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.01
  • 42.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
  • 2.26e4
32.30
  • 32.30
  • 17.63
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000017484.

Cross-references

EnsemblENSRNOG00000017484 (Gja5)
RGD2692 (Gja5)
EMBLAF021806, AF022136, BC070935, M76535, M83092
Uniprot/SWISSPROTCXA5_RAT, P28234

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