Gene: Aldh3b1 - ENSRNOG00000017512 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000017512
Name	Aldh3b1
Description	aldehyde dehydrogenase 3 family, member B1 [Source:RGD Symbol;Acc:1359546]
Organism	Rattus norvegicus (rat)
Synonym(s)	mgc95025
Orthologs(s)	12 orthologs
Paralog(s)	3 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	958 958 8.64e3	96.51 96.51 68.53	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.41e3 1.41e3	94.87 94.87	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.83e3 3.83e3 8.29e3	86.07 86.07 69.79	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	5.10e3 5.10e3 1.07e4	81.44 81.44 61.13	AEIR AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.99e3 7.99e3	70.89 70.89	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.20e3 8.20e3	70.14 70.14	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.13e3 9.13e3	66.74 66.74	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.48e3 9.48e3	65.46 65.46	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.02e4 1.02e4	62.90 62.90	AEIR AEIR
UBERON:0002107	liver	[+] 3 stages UBERON:0034920infant stage RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage	1.05e4 1.05e4 1.15e4 1.25e4	61.88 61.88 58.13 54.57	AEIR AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.14e4 1.14e4	58.64 58.64	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.15e4 1.15e4	57.98 57.98	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.20e4 1.20e4	56.34 56.34	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.20e4 1.20e4	56.14 56.14	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.21e4 1.21e4	56.00 56.00	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.23e4 1.23e4	55.31 55.31	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.26e4 1.26e4	54.18 54.18	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.27e4 1.27e4	53.79 53.79	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.29e4 1.29e4	52.85 52.85	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.35e4 1.35e4	50.76 50.76	AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.43e4 1.43e4	47.93 47.93	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Murinae	1 species Mus musculus (mouse)	1 gene ENSMUSG00000024885 Aldh3b1	Compare expression	[+]
Rodentia	2 species Mus musculus (mouse) Cavia porcellus (guinea pig)	2 genes ENSMUSG00000024885 Aldh3b1 ENSCPOG00000021502 ALDH3B1	Compare expression	[+]
Euarchontoglires	5 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Cavia porcellus (guinea pig)	5 genes ENSG00000006534 ALDH3B1 ENSMUSG00000024885 Aldh3b1 ENSGGOG00000004995 ALDH3B1 ENSMMUG00000023188 ALDH3B1 ENSCPOG00000021502 ALDH3B1	Compare expression	[+]
Theria	6 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Cavia porcellus (guinea pig) Monodelphis domestica (opossum)	6 genes ENSG00000006534 ALDH3B1 ENSMUSG00000024885 Aldh3b1 ENSGGOG00000004995 ALDH3B1 ENSMMUG00000023188 ALDH3B1 ENSCPOG00000021502 ALDH3B1 ENSMODG00000021331	Compare expression	[+]
Amniota	8 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole)	10 genes ENSG00000006534 ALDH3B1 ENSMUSG00000024885 Aldh3b1 ENSGGOG00000004995 ALDH3B1 ENSMMUG00000023188 ALDH3B1 ENSCPOG00000021502 ALDH3B1 ENSMODG00000021331 ENSGALG00000003490 ENSGALG00000028936 ENSACAG00000008728 ENSACAG00000015237	Compare expression	[+]
Tetrapoda	9 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	11 genes ENSG00000006534 ALDH3B1 ENSMUSG00000024885 Aldh3b1 ENSGGOG00000004995 ALDH3B1 ENSMMUG00000023188 ALDH3B1 ENSCPOG00000021502 ALDH3B1 ENSMODG00000021331 ENSGALG00000003490 ENSGALG00000028936 ENSACAG00000008728 ENSACAG00000015237 ENSXETG00000012447 aldh3b2	Compare expression	[+]
Euteleostomi	10 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	12 genes ENSG00000006534 ALDH3B1 ENSMUSG00000024885 Aldh3b1 ENSDARG00000013839 aldh3b1 ENSGGOG00000004995 ALDH3B1 ENSMMUG00000023188 ALDH3B1 ENSCPOG00000021502 ALDH3B1 ENSMODG00000021331 ENSGALG00000003490 ENSGALG00000028936 ENSACAG00000008728 ENSACAG00000015237 ENSXETG00000012447 aldh3b2	Compare expression	[+]

Orthology information comes from OMA : ENSRNOG00000017512.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Eutheria	1 gene ENSRNOG00000017872 LOC688778	Compare expression	[+]
Opisthokonta	3 genes ENSRNOG00000002331 Aldh3a1 ENSRNOG00000002342 Aldh3a2 ENSRNOG00000017872 LOC688778	Compare expression	[+]

Paralogy information comes from OMA : ENSRNOG00000017512.

Cross-references

Ensembl	ENSRNOG00000017512 (Aldh3b1)
RGD	1359546 (Aldh3b1)
EMBL	AABR07006085, AABR07006086, AABR07006087, AABR07006088, BC083850
Uniprot/SPTREMBL	A0A0G2K7W2, A0A0G2K7W2_RAT
Uniprot/SWISSPROT	AL3B1_RAT, Q5XI42