R. norvegicus Gene: Cdhr5 - ENSRNOG00000017762 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017762
NameCdhr5
Descriptioncadherin-related family member 5 [Source:RGD Symbol;Acc:620504]
OrganismRattus norvegicus (rat)
Synonym(s)gp100, mgc114263, mucdhl, mupcdh, q4fzy9

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
219
  • 219
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
315
  • 315
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
96.27
  • 96.27
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.17e3
  • 1.17e3
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.57e3
  • 4.57e3
83.35
  • 83.35
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.20e3
  • 9.20e3
66.43
  • 66.43
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.02
  • 63.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.32e4
61.76
  • 61.76
  • 51.75
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
  • 1.65e4
57.10
  • 57.10
  • 39.86
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.32
  • 54.32
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.47
  • 53.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
50.28
  • 50.28
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.05
  • 50.05
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.65
  • 46.65
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
46.42
  • 46.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.61
  • 44.61
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.65e4
40.93
  • 40.93
  • 39.97
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.94
  • 39.94
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.52
  • 35.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC118351, AF221952, BC098904, CH473953
EnsemblENSRNOG00000017762 (Cdhr5)
RGD620504 (Cdhr5)
Uniprot/SPTREMBLD3ZIC6, D3ZIC6_RAT
Uniprot/SWISSPROTCDHR5_RAT, Q9JIK1

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