R. norvegicus Gene: S100z - ENSRNOG00000017998 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000017998
NameS100z
DescriptionS100 calcium binding protein Z [Source:RGD Symbol;Acc:1562902]
OrganismRattus norvegicus (rat)
Synonym(s)loc294661, rgd1562902
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.76e3
  • 2.76e3
  • 4.80e3
89.96
  • 89.96
  • 82.52
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.86e3
  • 9.86e3
  • 2.29e4
64.09
  • 64.09
  • 16.55
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.73
  • 59.73
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
53.02
  • 53.02
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.16
  • 42.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.51
  • 38.51
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.94
  • 35.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.45
  • 31.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
28.31
  • 28.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.50
  • 27.50
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.12e4
  • 2.12e4
22.77
  • 22.77
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
22.51
  • 22.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.25e4
  • 2.25e4
18.20
  • 18.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000017998.

Cross-references

EnsemblENSRNOG00000017998 (S100z)
RGD1562902 (S100z)
EMBLAABR07007713
Uniprot/SPTREMBLD3ZEJ4, D3ZEJ4_RAT

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