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R. norvegicus Gene: Mrc1 - ENSRNOG00000018251 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000018251
NameMrc1
Descriptionmannose receptor, C type 1 [Source:RGD Symbol;Acc:1309353]
OrganismRattus norvegicus (rat)
Synonym(s)loc291327
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
4.08e3
  • 4.08e3
  • 4.46e3
  • 6.03e3
85.13
  • 85.13
  • 83.74
  • 78.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.32e3
  • 4.32e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.37e3
  • 4.37e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.99e3
  • 6.99e3
  • 7.56e3
74.54
  • 74.54
  • 72.48
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.59e3
  • 7.59e3
72.36
  • 72.36
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.70e3
  • 7.70e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.26e3
  • 8.26e3
69.91
  • 69.91
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.37e3
  • 8.37e3
69.53
  • 69.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.76e3
  • 8.76e3
68.10
  • 68.10
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.00e3
  • 9.00e3
67.22
  • 67.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.36
  • 62.36
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.98
  • 60.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.49e4
60.96
  • 60.96
  • 45.85
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.28
  • 57.28
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.79
  • 54.79
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.44e4
53.30
  • 53.30
  • 47.68
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.47
  • 49.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.05
  • 49.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000018251.

Cross-references

EnsemblENSRNOG00000018251 (Mrc1)
RGD1309353 (Mrc1)
EMBLAABR07028690, AABR07028691
Uniprot/SPTREMBLD3ZD31, D3ZD31_RAT

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