R. norvegicus Gene: Pitpnm1 - ENSRNOG00000018553 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000018553
NamePitpnm1
Descriptionphosphatidylinositol transfer protein, membrane-associated 1 [Source:RGD Symbol;Acc:1306710]
OrganismRattus norvegicus (rat)
Synonym(s)loc361694, mgc95131, nir-2, nir2, pitpnm, pitpnm 1
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
913
  • 913
  • 2.04e3
96.68
  • 96.68
  • 92.58
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 1.08e4
95.46
  • 95.46
  • 60.55
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.29
  • 94.29
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.68e3
  • 2.68e3
90.25
  • 90.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
89.05
  • 89.05
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.02e3
  • 3.02e3
89.02
  • 89.02
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.42e3
  • 3.42e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
3.45e3
  • 3.45e3
  • 3.55e3
87.44
  • 87.44
  • 87.07
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.15e3
  • 4.15e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.62e3
  • 4.62e3
83.17
  • 83.17
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
81.31
  • 81.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.38e3
  • 5.38e3
  • 2.26e4
80.41
  • 80.41
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.62e3
  • 6.62e3
75.89
  • 75.89
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.03e3
  • 7.03e3
74.40
  • 74.40
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.57e3
  • 7.57e3
72.41
  • 72.41
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
  • 8.65e3
  • 8.94e3
70.19
  • 70.19
  • 68.49
  • 67.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.82e3
  • 8.82e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.92e3
  • 8.92e3
67.50
  • 67.50
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.18e3
  • 9.18e3
66.57
  • 66.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia1 species1 geneCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000018553.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000018553.

Cross-references

EnsemblENSRNOG00000018553 (Pitpnm1)
RGD1306710 (Pitpnm1)
EMBLBC085945
Uniprot/SWISSPROTPITM1_RAT, Q5U2N3

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