R. norvegicus Gene: Sec22b - ENSRNOG00000018673 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000018673
NameSec22b
DescriptionSEC22 vesicle trafficking protein homolog B (S. cerevisiae) [Source:RGD Symbol;Acc:1309988]
OrganismRattus norvegicus (rat)
Synonym(s)ers-24, ers24, loc310710, mgc112717, sec22l1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
94.94463
  • 94.94463
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.53543
  • 94.53543
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
93.66944
  • 93.66944
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.86e3
  • 1.86e3
93.21990
  • 93.21990
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.88e3
  • 1.88e3
  • 2.70e3
93.15523
  • 93.15523
  • 90.16107
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.97e3
  • 1.97e3
92.82927
  • 92.82927
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.03e3
  • 2.03e3
92.60065
  • 92.60065
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.41e3
  • 2.41e3
91.21454
  • 91.21454
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.58e3
  • 2.58e3
90.57581
  • 90.57581
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
  • 2.73e3
90.31933
  • 90.31933
  • 90.03013
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
89.39939
  • 89.39939
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
89.38823
  • 89.38823
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
89.22125
  • 89.22125
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.97e3
  • 2.97e3
89.16165
  • 89.16165
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.04e3
  • 3.04e3
88.92592
  • 88.92592
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.23e3
  • 3.23e3
88.22504
  • 88.22504
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
87.98114
  • 87.98114
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.41e3
  • 3.41e3
87.57756
  • 87.57756
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.77e3
  • 3.77e3
86.24736
  • 86.24736
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.05e3
  • 7.05e3
  • 1.45e4
74.29624
  • 74.29624
  • 46.93803
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC098725
EnsemblENSRNOG00000018673 (Sec22b)
RGD1309988 (Sec22b)
Uniprot/SWISSPROTQ4KM74, SC22B_RAT

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