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R. norvegicus Gene: B3gnt3 - ENSRNOG00000018764 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000018764
NameB3gnt3
DescriptionUDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:RGD Symbol;Acc:1305151]
OrganismRattus norvegicus (rat)
Synonym(s)loc290638
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.60e3
  • 4.60e3
83.24
  • 83.24
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.60e3
  • 7.60e3
72.31
  • 72.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
  • 2.16e4
53.65
  • 53.65
  • 21.27
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.63
  • 51.63
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.24
  • 50.24
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.43
  • 47.43
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.60
  • 44.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.35
  • 42.35
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.01
  • 38.01
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.90
  • 34.90
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
31.74
  • 31.74
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.91e4
  • 1.91e4
30.53
  • 30.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.09e4
  • 2.09e4
  • 2.26e4
23.70
  • 23.70
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.12e4
  • 2.12e4
  • 2.21e4
22.82
  • 22.82
  • 19.54
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
22.55
  • 22.55
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
22.46
  • 22.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Tetrapoda13 species14 genesCompare expression
Euteleostomi14 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000018764.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000018764.

Cross-references

EnsemblENSRNOG00000018764 (B3gnt3)
RGD1305151 (B3gnt3)
EMBLAABR07024869, CH474031
Uniprot/SPTREMBLD3ZX31, D3ZX31_RAT

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