R. norvegicus Gene: Hmgcs2 - ENSRNOG00000019120 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019120
NameHmgcs2
Description3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) [Source:RGD Symbol;Acc:2804]
OrganismRattus norvegicus (rat)
Synonym(s)f1m9q5, hmgcs1, mt3h3mg

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
97.6
  • 97.6
99.63896
  • 99.63896
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.13477
  • 94.13477
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.11e3
  • 4.11e3
84.66220
  • 84.66220
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.38e3
  • 5.38e3
79.89635
  • 79.89635
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
73.95748
  • 73.95748
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
70.37420
  • 70.37420
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
69.85096
  • 69.85096
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
59.59154
  • 59.59154
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
56.31890
  • 56.31890
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
  • 1.51e4
43.50695
  • 43.50695
  • 43.50527
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07012623, AABR07012624, BC078695, BC083543, CH474015
EnsemblENSRNOG00000019120 (Hmgcs2)
RGD2804 (Hmgcs2)
Uniprot/SPTREMBLQ68G44, Q68G44_RAT

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