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R. norvegicus Gene: Ercc6l2 - ENSRNOG00000019175 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019175
NameErcc6l2
Descriptionexcision repair cross-complementation group 6-like 2 [Source:RGD Symbol;Acc:1561537]
OrganismRattus norvegicus (rat)
Synonym(s)loc361197, rgd1561537
Orthologs(s)6 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.49e3
  • 5.49e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.73e3
  • 5.73e3
79.14
  • 79.14
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
78.50
  • 78.50
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.67e3
  • 6.67e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.96e3
  • 6.96e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.02e3
  • 7.02e3
74.42
  • 74.42
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
74.25
  • 74.25
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.26e3
  • 7.26e3
73.55
  • 73.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
7.35e3
  • 7.35e3
  • 7.69e3
  • 8.42e3
73.22
  • 73.22
  • 71.98
  • 69.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.60e3
  • 7.60e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.75e3
  • 7.75e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.81e3
  • 7.81e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
71.12
  • 71.12
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.69e3
  • 8.69e3
68.36
  • 68.36
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.92e3
  • 8.92e3
  • 1.04e4
67.52
  • 67.52
  • 61.95
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.57e3
  • 9.57e3
  • 1.22e4
65.15
  • 65.15
  • 55.46
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSRNOG00000019175 (Ercc6l2)
RGD1561537 (Ercc6l2)
EMBLAABR07026788, AABR07026789
Uniprot/SPTREMBLD3ZPU4, D3ZPU4_RAT

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