R. norvegicus Gene: Stx1b - ENSRNOG00000019193 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019193
NameStx1b
Descriptionsyntaxin 1B [Source:RGD Symbol;Acc:3784]
OrganismRattus norvegicus (rat)
Synonym(s)p32853, p35b, stx1b2, stx2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
365
  • 365
98.63903
  • 98.63903
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.28e3
  • 1.28e3
  • 1.44e3
95.23875
  • 95.23875
  • 94.63189
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.03015
  • 62.03015
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
46.89647
  • 46.89647
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
42.10473
  • 42.10473
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
36.34528
  • 36.34528
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
35.36209
  • 35.36209
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
34.44381
  • 34.44381
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
33.77361
  • 33.77361
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
31.32439
  • 31.32439
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLM95735
EnsemblENSRNOG00000019193 (Stx1b)
RGD3784 (Stx1b)
Uniprot/SWISSPROTP61265, STX1B_RAT

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