R. norvegicus Gene: Stx1b - ENSRNOG00000019193 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019193
NameStx1b
Descriptionsyntaxin 1B [Source:RGD Symbol;Acc:3784]
OrganismRattus norvegicus (rat)
Synonym(s)p32853, p35b, stx1b2, stx2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
338
  • 338
  • 744
98.77098
  • 98.77098
  • 97.29135
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
413
  • 413
  • 812
98.49757
  • 98.49757
  • 97.04198
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
450
  • 450
98.36361
  • 98.36361
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
  • 1.35e3
95.55254
  • 95.55254
  • 95.09611
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
  • 1.15e4
68.35219
  • 68.35219
  • 58.03910
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.13725
  • 59.13725
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.14863
  • 50.14863
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.61885
  • 49.61885
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.31933
  • 48.31933
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.16016
  • 48.16016
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.72984
  • 46.72984
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
46.45939
  • 46.45939
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
46.15450
  • 46.15450
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.23059
  • 44.23059
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.18861
  • 44.18861
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.16610
  • 44.16610
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.56651
  • 43.56651
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.07674
  • 42.07674
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.89364
  • 36.89364
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.88576
  • 35.88576
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.34285
  • 35.34285
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
  • 2.26e4
34.90032
  • 34.90032
  • 17.62593
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLM95735
EnsemblENSRNOG00000019193 (Stx1b)
RGD3784 (Stx1b)
Uniprot/SWISSPROTP61265, STX1B_RAT

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